ant:
<ant>
  <mkdir dir="/Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_redistribution" />
  <mkdir dir="/Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_testing" />
</ant>
mcc -o PLSMaker8 -W WinMain:PLSMaker8 -T link:exe -d /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_testing -v /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/ontogeny/aheadw.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/CVAGen/AuxBox.fig -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/CVAGen/AuxBox.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/CVAGen/AuxBoxsw.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/basereg.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/Omodel/BootResid.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/centerref.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/centpos.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/centsize.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/chamat2array.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/CopyBigImage.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/CopyBigImagePrint.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/dload.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/eigsort.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/formrotate.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/fullpdist.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/getconsensus.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/getconsensuspca.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/getconsensuspcafull.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/getfullpsup.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/getpsup.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/getpw_arbit.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/getpwpca.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/gettpse.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/gettspl.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/Omodel/goOm.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/ontogeny/growveceq.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/meth3sup.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/MezeySpace/mezeyangle.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/MezeySpace/mezeysw.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/mfload.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/mfload3.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/Omodel/OModel.fig -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/Omodel/OModel.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/OModel8.fig -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/OModel8.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/Omodel/ondsw.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/pcaalign.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/plot2svg_20101128/plot2svg.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSAngle/PLSAngle8.fig -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSAngle/PLSAngle8.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSAngle/PLSAnglesw.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8.fig -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMakersw.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/RefAngleSetup.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/reversepw6u.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/reversepwarb.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/reversepwb.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/rftra.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/rotationhandler.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/scpcoeff_arbrot.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/scpcoeffpca.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/setsymbolfill.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/shownonshape.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/showpw4template.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/showpw5.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/ontogeny/showshape.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/ontogeny/showshape_rot.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/MezeySpace/SpaceAngle8.fig -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/MezeySpace/SpaceAngle8.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/standardsize.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/templateorient.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/UniArbitrary.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/UniAxis.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/uniparmproc.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/uspline.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/vcor.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/vertxy.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/wsspline.m -a /Users/hsheets/Documents/IMP_Code/paleo_8/MAT/statstuff/xyfromvert.m 
[Warning: Duplicate directory name:
/private/tmp/../../Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock] 
Compiler version: 5.0 (R2013b)
Dependency analysis by DEPFUN.
Processing /Applications/MATLAB_R2013b.app/toolbox/matlab/maci64/mcc.enc
Processing /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/CVAGen/AuxBox.fig
Processing /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/Omodel/OModel.fig
Processing /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/OModel8.fig
Processing /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSAngle/PLSAngle8.fig
Processing /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8.fig
Processing /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/MezeySpace/SpaceAngle8.fig
Processing /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/MezeySpace/SpaceAngle6a.fig
Processing /Applications/MATLAB_R2013b.app/toolbox/shared/spcuilib/maci64/mcc.enc
Processing include files...
2 item(s) added.
Processing directories installed with MCR...
The file /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_testing/mccExcludedFiles.log contains a list of functions excluded from the CTF archive.
0 item(s) added.
Generating MATLAB path for the compiled application...
Created 59 path items.
[Warning: Adding path
"/Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock" to Compiler
path instance.] 
Parsing file "/Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8.m"
	(Referenced from: "Compiler Command Line").
Parsing file "/Applications/MATLAB_R2013b.app/toolbox/compiler/deploy/deployprint.m"
	(Referenced from: "Compiler Command Line").
Parsing file "/Applications/MATLAB_R2013b.app/toolbox/compiler/deploy/printdlg.m"
	(Referenced from: "Compiler Command Line").
Deleting 0 temporary MEX authorization files.
Generating file "/Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_testing/readme.txt".
Generating file "/Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_testing/run_PLSMaker8.sh".
Packaging...
Adding custom icon /Applications/MATLAB_R2013b.app/toolbox/compiler/Resources/default_icon.icns to /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_testing/PLSMaker8.app.
Creating the bundle...
Copying $/Applications/MATLAB_R2013b.app/toolbox/compiler/maci64/setup.app tp /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_redistribution/MyAppInstaller_web.app.
Copying $/Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_redistribution/bundle.zip tp /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_redistribution/MyAppInstaller_web.app/Contents/Resources/bundle.zip.
Copying $/Applications/MATLAB_R2013b.app/toolbox/compiler/Resources/default_splash.png tp /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_redistribution/MyAppInstaller_web.app/Contents/Resources/splash.png.
Copying $/Applications/MATLAB_R2013b.app/toolbox/compiler/Resources/default_icon.icns tp /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_redistribution/MyAppInstaller_web.app/Contents/Resources/installer.icns.
Web based installer created at /Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_redistribution/MyAppInstaller_web.app.
Packaging complete.
Source '/Users/hsheets/Documents/IMP_Code/paleo_8/zelditch/rev7/PLSBlock/PLSMaker8/for_testing/PLSMaker8.app' exists but is a directory
